From: Ben Roberts (
Date: Mon Jul 19 2004 - 21:12:38 CDT

Hi All,

I have the results from a simulation as a CHARMm format DCD file, that is,
containing Unit Cell information at each stage.

Is it possible to use anything in NAMD or VMD to either:

A) Obtain a radial distribution function, or

B) At least produce unit cell dimensions from the DCD so I can put them in
a PDB file and deal with them there?

Any advice would be appreciated.

Thanks in advance and best regards,


Benjamin P. Roberts, B.Sc.(Hons)
Ph.D. Student

Department of Medicinal Chemistry
Victorian College of Pharmacy (Monash University)
381 Royal Parade, Parkville VIC 3052, Australia

Phone +61 3 9903 9674 | Fax +61 3 9903 9582 | Mobile +61 401 784 940