VMD-L Mailing List

From: Hélder Bandarra Tavares (H.D.BandarraTavares_at_tudelft.nl)
Date: Wed May 27 2020 - 05:19:12 CDT

I'm trying to use Extrabonds to keep 2 atoms close to each other, so I created a .exb file containing "bond 7 86 1 5" and wrote in the configuration file "

extraBonds on
extraBondsFile Extrabonds.exb". However, when I try to run it I get the following message:

"
Charm++ fatal error:
FATAL ERROR: ABNORMAL EOF FOUND - buffer=*bond 7 86 1 5*"

Where 7 and 86 are the atoms I want to keep at a distance of 5 A. Do you know what I'm doing wrong?

Thank you in advance,
Hélder Tavares