VMD-L Mailing List

From: Jeff Saxon (jmsstarlight_at_gmail.com)
Date: Fri Nov 06 2020 - 06:27:51 CST

thank you Paolo!
It seems that there is a problem with the plugin. I've just tried to
install it with my vmd 1.9.3 (on windows) following all of the
instructions and although it appeared in the Analysis menu, while
clicking on it I got an error message from VMD
vmd > ERROR) Creation of window for 'ddt' failed (invalid command name
"ddt_tk").
mb I should try with my mac version of VMD
anyway does it allow to work directly on DLG filles and do some
operations on it (combining, reclustering)?
Thanks in advance!

пт, 6 нояб. 2020 г. в 10:00, Paolo Conflitti <paolo.conflitti_at_gmail.com>:
>
> Hi,
> There is a plugin called Drug Discovery Tool (DDT) that is available
> here: https://sites.google.com/site/vittoriolimongelli/downloads.
>
> Best regards,
> Paolo Conflitti
>
> Il 05/11/2020 17:45, Jeff Saxon ha scritto:
> > Dear VMD users!
> > Could you tell me whether there is some vmd's plugin that allows me to
> > read directly DLG filles (produced by autodock) and make some basic
> > operations on the conformational ensembles of the ligand?
> > I've tried to load directly DLG files from terminal command line
> > vmd *.dlg
> > but it recognized it as an attempt to load PDB files and eventually did nothing.
> >
> > Thank you for your help
> > J.
> >