VMD-L Mailing List

From: Axel Kohlmeyer (akohlmey_at_gmail.com)
Date: Wed Nov 17 2021 - 20:14:48 CST

You cannot change the "serial" property. It is "index + 1" and both are
read-only.

On Wed, Nov 17, 2021 at 8:37 PM Georcki Ropon <groponp_at_gmail.com> wrote:

> Dear user,
>
> I want change serial atom number , my number start with 3000 but I want
> all number (para chain B) start 1 2 3 4 ….
>
> Bellow my code but not fix it.
>
> mol new prot_orient_add_ter.pdb
>
> set prob [atomselect top "segid PROB"]
>
> set serials [$prob get serial]
>
> set count 0
> foreach atom $serials {
> $prob set serial $count
> incr $count
>
> }
>
> set all [atomselect top all]
> $all writepdb renum.pdb
> quit
> 

-- 
Dr. Axel Kohlmeyer  akohlmey_at_gmail.com  https://urldefense.com/v3/__http://goo.gl/1wk0__;!!DZ3fjg!pCS-0A_cOM8bP6xsGp1HXwxQSebmi-ZJ8YUtFg46w6z5wNFhje-VrXUSr4Do0mm_Zg$ 
College of Science & Technology, Temple University, Philadelphia PA, USA
International Centre for Theoretical Physics, Trieste. Italy.