VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Dec 01 2021 - 13:11:51 CST
- Next message: Axel Kohlmeyer: "Re: CIF file reader"
- Previous message: Kochnev, Iurii K: "molfile plugin compilation for webassembly"
- Next in thread: Strahs, Dr. Daniel Bernard: "Re: NYT article on SARS-CoV-2 aerosol+virion simulations w/ NAMD+VMD"
- Reply: Strahs, Dr. Daniel Bernard: "Re: NYT article on SARS-CoV-2 aerosol+virion simulations w/ NAMD+VMD"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
Hi,
I'm happy to share that today there's a nice NYT article
highlighting the work of a 50-person multi-institutional team of
researchers, led by Rommie Amaro's team at UCSD:
https://www.nytimes.com/interactive/2021/12/01/science/coronavirus-aerosol-simulation.html
I'm particularly proud that the article is packed with images and
movies made directly in VMD. The article shows one image I made w/ VMD
that set a new record for the largest QuickSurf representation
ever (I had to fix a few things in the code to do one this large!)
with over 1 billion atoms in the aerosol droplet+virion, combined
with VdW representation of all of the protein components.
The team's Supercomputing '21 Gordon Bell finalist presentation, link
to the paper in bioRxiv, and several key VMD movies are
all viewable here as well:
http://www.ks.uiuc.edu/Research/gb21airborne/
Best regards,
John Stone
vmd_at_ks.uiuc.edu
-- NIH Center for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 http://www.ks.uiuc.edu/~johns/ Phone: 217-244-3349 http://www.ks.uiuc.edu/Research/vmd/
- Next message: Axel Kohlmeyer: "Re: CIF file reader"
- Previous message: Kochnev, Iurii K: "molfile plugin compilation for webassembly"
- Next in thread: Strahs, Dr. Daniel Bernard: "Re: NYT article on SARS-CoV-2 aerosol+virion simulations w/ NAMD+VMD"
- Reply: Strahs, Dr. Daniel Bernard: "Re: NYT article on SARS-CoV-2 aerosol+virion simulations w/ NAMD+VMD"
- Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]