VMD-L Mailing List

From: Jorge Pikunic (jorge.pikunic_at_bioch.ox.ac.uk)
Date: Fri Oct 08 2004 - 12:38:47 CDT

Hi,

I am trying to use the psfgen plugin (1.3.3) using the new topology
files from MacKerell's website. The CHARMM27 files have CMAP statements,
so when I try to read the new topology files:

topology top_all27_prot_lipid.rtf

I get several lines like:
ERROR! FAILED TO RECOGNIZE CMAP

However, it seems that I can still build segments and write psf files.
Is that ERROR something that I can just ignore (giving me psf file
equivalent to one generated with top_all27_prot_lipid.inp)?

Thank you,

Jorge
PS: I sent a related message to the namd list to ask if CMAP has been
implemented in NAMD