From: Anna Modzelewska (
Date: Wed Jun 15 2005 - 09:35:01 CDT

I try to do a simulation with AutoIMD with VMD1.8.3 and NAMD 2.5b1 on Windows PC. After a few seconds a get an error: "Attempt to connnect to the simulation timed out!"
In attached .log file I found only the information about "abnormal program termination".

In the VMDTkConsole was written:
Info: writing psf file E:/autoimd/autoimd.psf
total of 66 atoms
total of 65 bonds
total of 96 angles
total of 31 dihedrals
total of 32 impropers
Info: psf file complete.
submitJob returned local localhost 1680
Error killing simulation.
couldn't execute "kill": no such file or directory
Done with AutoIMD.

Anyone has an idea what is wrong?


 Anna Modzelewska, M.Sc.
 International Institute of Molecular and Cell Biology
 Trojdena 4, 02-109 Warsaw, Poland
 phone: +48 22 5970721 fax: +48 22 5970715