VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Dec 07 2005 - 10:05:27 CST

Anthony,
  We have a standalone program that estimates macromolecular volume available
here, it might do what you need for the non-cavity regions:
  http://www.ks.uiuc.edu/Development/MDTools/molvolume/

  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Dec 07, 2005 at 12:01:53PM -0700, Anthony Cruz wrote:
> Hi:
> I want to determine the volume of my protein and the volume of the active
> site. This could be done with vmd??? any software???
>
> Best Regards
> Anthony 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078