VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Mar 08 2006 - 09:42:02 CST

Hi Francis,
  Here's a tiny script that will add atom labels for a specified
molecule and selection text, use "all" for the seltext parameter if
you want them for all atoms:

proc label_atoms { molid seltext } {
  set sel [atomselect $molid $seltext]
  set atomlist [$sel list]
  foreach {atom} $atomlist {
    set atomlabel [format "%d/%d" $molid $atom]
    label add Atoms $atomlabel
  }
  $sel delete
}

Enjoy,
  John Stone
  vmd_at_ks.uiuc.edu

On Wed, Mar 08, 2006 at 11:26:17AM +0100, FyD wrote:
> Dear All,
>
> Do you know a VMD command to visualize _all_ the atom names (label) in same time
> (instead of clicking on each atom one after the others) ?
>
> Thanks, regards, Francois 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078