VMD-L Mailing List

From: John Stone (johns_at_ks.uiuc.edu)
Date: Thu May 25 2006 - 14:17:20 CDT

Hi,
  We had some machine reinstalls going on yesterday and this morning
that delayed my builds somewhat. I've just posted the 1.8.5a3 build on
biocore, please give that new version a try and let me know how it works
for you.
  http://www.ks.uiuc.edu/Research/vmd/alpha/

  John Stone
  vmd_at_ks.uiuc.edu

On Thu, May 25, 2006 at 02:56:08PM +0800, mashaojienuaa wrote:
>
> Hi:
>
> Do you mean the version vmd-1.8.5a2. I downloaded it and tried it to my gamess output file. The molecule still can not display normally.
> > ----- Original Message -----
> > From: "John Stone" <johns_at_ks.uiuc.edu>
> > To: "Markus Dittrich" <dittrich_at_psc.edu>
> > Cc: "mashaojienuaa" <mashaojie_at_nuaa.edu.cn>; <vmd_at_ks.uiuc.edu>
> > Sent: Thursday, May 25, 2006 2:39 AM
> > Subject: (瑞星提示-此邮件可能是垃圾邮件)Re: vmd-l: gamess plugin error when using symmetry operations
> >
> >
> >> Hi,
> >> I'm building new plugins now and should have it posted on
> >> biocore this afternoon if all goes well:
> >> http://www.ks.uiuc.edu/Research/vmd/alpha/
> >>
> >> John
> >>
> >> On Wed, May 24, 2006 at 10:44:21AM -0400, Markus Dittrich wrote:
> >>> On Tuesday 23 May 2006 20:26, you wrote:
> >>> > Thank you for the response, a gamess output file with C3 symmetry geometry
> >>> has been attached
> >>>
> >>> Hi,
> >>>
> >>> Thank you very much for providing the file and I've fixed the problem
> >>> in the VMD source tree. Hopefully, John Stone will be able to provide
> >>> you with an updated version of the plugin. Please let me know if
> >>> you still have trouble reading your input file properly and I'll have
> >>> another look.
> >>>
> >>> best,
> >>> Markus
> >>>
> >>> --
> >>> ****************************************************************
> >>> Markus Dittrich, Ph.D.
> >>> Theoretical and Computational Biophysics Group
> >>> Beckman Institute for Advanced Science and Technology
> >>> University of Illinois at Urbana-Champaign
> >>> 405 N. Mathews Ave. #3121, Urbana, IL 61801
> >>> phone (office): (217) 244 1612
> >>> email: markus_at_ks.uiuc.edu
> >>> web : http://www.ks.uiuc.edu/~markus
> >>> ****************************************************************
> >>
> >>
> >>
> >> --
> >> NIH Resource for Macromolecular Modeling and Bioinformatics
> >> Beckman Institute for Advanced Science and Technology
> >> University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
> >> Email: johns_at_ks.uiuc.edu Phone: 217-244-3349
> >> WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
> >> 

-- 
NIH Resource for Macromolecular Modeling and Bioinformatics
Beckman Institute for Advanced Science and Technology
University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801
Email: johns_at_ks.uiuc.edu                 Phone: 217-244-3349
  WWW: http://www.ks.uiuc.edu/~johns/      Fax: 217-244-6078