VMD-L Mailing List

From: Leonardo Trabuco (ltrabuco_at_ks.uiuc.edu)
Date: Tue Jul 11 2006 - 11:05:57 CDT

Hi,

On Tue, Jul 11, 2006 at 11:02:20AM -0400, Yuri Nedialkov wrote:
> I have a problem to find the way to color the part of the atom in one color
> in VMD. For example, in nucleotide-three-phosphate (NTP) I need to color
> three phosphates in one color and don't touch the other part of the
> molecule.

You can create a new representation with only the atoms you want to
change the color, and change the color of the representation to whatever
you want.

Best,
Leo 

-- 
Leonardo Giantini Trabuco
Ph.D. candidate
Center for Biophysics and Computational Biology
University of Illinois at Urbana-Champaign