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From: s104fendy (s104fendy_at_mail.chem.itb.ac.id)
Date: Fri May 18 2007 - 03:07:05 CDT
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Hi, everyone
I am also a new user in VMD. I already have dcd file of CI2 unfolding during heating at 800 K.
1)I wonder if there is a script to know which HYDROGEN ATOM(the donor and acceptor) is broken during the simulation (also with the time when the hydrogen bond is broken)?
2)I wonder if there is a script to know which SALT BRIDGES is broken during the simulation (also with the time when the salt bridges is broken)?
Thank you very much.
I appreciate all answer from all of you.
GBU
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