VMD-L Mailing List

From: Andrew DeYoung (adeyoung_at_andrew.cmu.edu)
Date: Tue May 15 2012 - 12:49:22 CDT

Hi,

Is it possible to make only certain atoms transparent? I have a PDB file
with 438 atoms. I would like to display all of them, but I only want to
draw attention to a small number of them. I would like:

atoms 73,76,128,133,377,378,379,380,437,438 to be opaque

and

all remaining atoms to be transparent (or non-emphasized in some other way).

Thank you!

Andrew DeYoung
Carnegie Mellon University