VMD-L Mailing List
From: John Stone (johns_at_ks.uiuc.edu)
Date: Wed Nov 30 2005 - 17:44:05 CST
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Hi,
VMD will read Charmm "DCD" trajectories. It can also read charmm
ascii coordinate files, but those are just a single frame. You need
to load a DCD from your charmm simulation into VMD.
John Stone
vmd_at_ks.uiuc.edu
On Wed, Nov 30, 2005 at 06:37:16PM -0500, Samuel Flores wrote:
> Hi guys,
>
> It's my understanding that VMD can visualize a CHARMm trajectory. However
> simply reading in the psf and .cor files gives me a blank screen. Can
> anyone tell me the procedure for this?
>
> Sam
>
> Samuel Flores
> Graduate Student
> Gerstein Lab
>
> Office:
> Bass 437
> 266 Whitney Avenue
> New Haven, CT 06520
> 203.432.5405
>
> Home:
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> cell: 203.747.2682
>
>
-- NIH Resource for Macromolecular Modeling and Bioinformatics Beckman Institute for Advanced Science and Technology University of Illinois, 405 N. Mathews Ave, Urbana, IL 61801 Email: johns_at_ks.uiuc.edu Phone: 217-244-3349 WWW: http://www.ks.uiuc.edu/~johns/ Fax: 217-244-6078
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