Tutorial-l Mailing List
From: Corey Fugate (fugate_at_hawaii.edu)
Date: Thu Jul 09 2009 - 13:51:59 CDT
- Next message: Chris Harrison: "Re: troubles with generating pdb with hydrogens"
 - Previous message: Courtney Taylor: "RDF for all atoms in multiple frames"
 - Next in thread: Chris Harrison: "Re: troubles with generating pdb with hydrogens"
 - Reply: Chris Harrison: "Re: troubles with generating pdb with hydrogens"
 - Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
 
        Page 9 of the Unix/Mac NAMD tutorial step 4.  I have 1UBQ.pdb open in  
vmd, I open the Tk console and type (while in the 1-1-build dir) -
set ubq [atomselect top protein]  (press enter)
atomselect0 is printed to the screen.  After using writepdb ubqp.pdb  
the pdb file is written, n=but is completely empty.
                Am I missing something?
                
**
** Visit http://www.greatcircle.com/majordomo/ for more info on majordomo
**
- Next message: Chris Harrison: "Re: troubles with generating pdb with hydrogens"
 - Previous message: Courtney Taylor: "RDF for all atoms in multiple frames"
 - Next in thread: Chris Harrison: "Re: troubles with generating pdb with hydrogens"
 - Reply: Chris Harrison: "Re: troubles with generating pdb with hydrogens"
 - Messages sorted by: [ date ] [ thread ] [ subject ] [ author ] [ attachment ]
 



